PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009132121.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family C2H2
Protein Properties Length: 195aa    MW: 22196 Da    PI: 9.061
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009132121.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.0001497119123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_009132121.1  97 FSCNYCQRKFYSSQALGGHQNAH 119
                     89******************988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.74E-694124No hitNo description
PROSITE profilePS5015711.09497124IPR007087Zinc finger, C2H2
PROSITE patternPS00028099119IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MSFEETYTHL YTLYIRPLKP KTFKHTSLLL IISLTSLFSL TKRLGMDFQP NTSLRLSLPS  60
YKNHQLNLEL VLDPSSMSSS SSSSTNSSSC LEQPRVFSCN YCQRKFYSSQ ALGGHQNAHK  120
LERTLAKKSR ELFRSSTTVD VDQPYPFSGR FELYGRGYEG FVESGGPRDF SGRRVPESGI  180
DQDQEMSHLD LSLRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009132121.11e-141PREDICTED: zinc finger protein 2
RefseqXP_013740323.11e-141PREDICTED: zinc finger protein 2
SwissprotQ392612e-90ZFP2_ARATH; Zinc finger protein 2
TrEMBLA0A078FFX01e-106A0A078FFX0_BRANA; BnaC03g12900D protein
TrEMBLA0A0D3B2Z71e-106A0A0D3B2Z7_BRAOL; Uncharacterized protein
TrEMBLM4CRH41e-106M4CRH4_BRARP; Uncharacterized protein
STRINGBra006815.1-P1e-106(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM66212844
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.13e-89zinc finger protein 2